Transcript: ENST00000261531.7 SNW1-001

Description

SNW domain containing 1 [Source:HGNC Symbol;Acc:16696]

Gene Synonyms

Bx42, NCOA-62, NCoA-62, PRPF45, Prp45, SKIIP, SKIP

Location

Chromosome 14: 78,183,942-78,227,533 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 6 domains and features, is associated with 19395 variant alleles and maps to 650 oligo probes.

Gene

This transcript is a product of gene ENSG00000100603.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261531.7	SNW1-001	2163	536aa	ENSP00000261531.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9867	G3V4X8 Q13573	NM_012245.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555761.1	SNW1-003	1855	571aa	ENSP00000451129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3A4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554775.1	SNW1-004	1687	374aa	ENSP00000452059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554324.1	SNW1-007	584	185aa	ENSP00000452473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5R3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556428.1	SNW1-002	1966	47aa	ENSP00000451741.1	Nonsense mediated decay		G3V4E0	-	-
ENST00000557663.1	SNW1-006	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553565.1	SNW1-008	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,163 bps, Translation length: 536 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13573

CCDS

This transcript is a member of the Human CCDS set: CCDS9867

Version

ENST00000261531.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000413912 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261531.7 SNW1-001

Summary