Human (GRCh37.p13)
Description

serine palmitoyltransferase, long chain base subunit 2 [Source:HGNC Symbol;Acc:11278]

Gene Synonyms

HSN1C, KIAA0526, LCB2, LCB2A, NSAN1C, SPT2, hLCB2a

Location
About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 49660 variant alleles and maps to 649 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000216484.2SPTLC2-0018170562aaENSP00000216484.2
 
Protein coding
CCDS9865O15270 NM_004863.3Ensembl CanonicalGENCODE basic
ENST00000554901.1SPTLC2-0021518407aaENSP00000452189.1
 
Protein coding
--CDS 5' incomplete
ENST00000556607.1SPTLC2-00546040aaENSP00000451029.1
 
Nonsense mediated decay
H0YJ96 -CDS 5' incomplete
ENST00000556264.1SPTLC2-006263No protein-
 
Processed transcript
---
ENST00000554365.1SPTLC2-004604No protein-
 
Retained intron
---
ENST00000557566.1SPTLC2-003510No protein-
 
Retained intron
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Statistics

Exons: 12, Coding exons: 12, Transcript length: 8,170 bps, Translation length: 562 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15270

CCDS

This transcript is a member of the Human CCDS set: CCDS9865

Version

ENST00000216484.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000414030 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.