Transcript: ENST00000444518.2 HMGXB4-201

Description

HMG box domain containing 4 [Source:HGNC Symbol;Acc:5003]

Gene Synonyms

HMG2L1, HMGBCG, THC211630

Location

Chromosome 22: 35,653,480-35,689,762 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 15846 variant alleles and maps to 534 oligo probes.

Gene

This transcript is a product of gene ENSG00000100281.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216106.5	HMGXB4-002	4047	601aa	ENSP00000216106.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33641	B0QXZ8 B0QXZ9 Q7Z641 Q9UGU5	NM_001003681.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444518.2	HMGXB4-201	2178	492aa	ENSP00000398302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QXZ8 B0QXZ9 Q9UGU5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455359.1	HMGXB4-003	1325	284aa	ENSP00000415500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QXZ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420166.1	HMGXB4-004	1257	285aa	ENSP00000401658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QXZ8 B0QXZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418170.1	HMGXB4-001	4216	92aa	ENSP00000395532.1	Nonsense mediated decay		F8WDU7	-	-
ENST00000466438.1	HMGXB4-005	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498325.1	HMGXB4-006	867	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498212.1	HMGXB4-008	778	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464480.1	HMGXB4-007	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 7, Transcript length: 2,178 bps, Translation length: 492 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGU5

Version

ENST00000444518.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000444518.2 HMGXB4-201

Summary