Transcript: ENST00000477969.1 SLC5A1-002

Description

solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:HGNC Symbol;Acc:11036]

Gene Synonyms

D22S675, NAGT, SGLT1

Location

About this transcript

This transcript has 5 exons, is associated with 7213 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266088.4	SLC5A1-001	5061	664aa	ENSP00000266088.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13902	A4QPH0 P13866	NM_000343.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543737.1	SLC5A1-201	2088	537aa	ENSP00000444898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58805	P13866	NM_001256314.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477969.1	SLC5A1-002	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486394.1	SLC5A1-003	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 801 bps,

Version

ENST00000477969.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000129247 (version 1)