Transcript: ENST00000248901.6 CYTH4-001

Description

cytohesin 4 [Source:HGNC Symbol;Acc:9505]

Gene Synonyms

CYT4, DJ63G5.1, PSCD4

Location

Chromosome 22: 37,678,424-37,711,382 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features, is associated with 14869 variant alleles and maps to 548 oligo probes.

Gene

This transcript is a product of gene ENSG00000100055.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248901.6	CYTH4-001	3202	394aa	ENSP00000248901.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13946	B1AHH4 B4E2V8 Q8WWE8 Q9UIA0	NM_013385.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457992.1	CYTH4-014	652	117aa	ENSP00000405442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000405206.3	CYTH4-009	636	157aa	ENSP00000384280.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH4 B1AHH6 Q8WWE8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402997.1	CYTH4-008	633	154aa	ENSP00000385997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH4 B1AHH5 Q8WWE8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446506.1	CYTH4-013	569	147aa	ENSP00000409579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000439667.1	CYTH4-010	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000447919.1	CYTH4-011	277	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462927.1	CYTH4-002	3667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469886.1	CYTH4-004	1128	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480510.1	CYTH4-006	815	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467664.1	CYTH4-007	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,202 bps, Translation length: 394 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UIA0

CCDS

This transcript is a member of the Human CCDS set: CCDS13946

Version

ENST00000248901.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318917 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000248901.6 CYTH4-001

Summary