Transcript: ENST00000588649.2 POLRMT-001

Description

polymerase (RNA) mitochondrial (DNA directed) [Source:HGNC Symbol;Acc:9200]

Gene Synonyms

APOLMT, MTRNAP, MTRPOL, h-mtRPOL

Location

Chromosome 19: 617,223-633,597 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 21 domains and features, is associated with 14260 variant alleles and maps to 860 oligo probes.

Gene

This transcript is a product of gene ENSG00000099821.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000588649.2	POLRMT-001	3829	1230aa	ENSP00000465759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12036	O00411	NM_005035.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590573.2	POLRMT-007	1048	349aa	ENSP00000466504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000590336.1	POLRMT-015	429	143aa	ENSP00000468658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000607260.1	POLRMT-016	590	62aa	ENSP00000475425.1	Nonsense mediated decay		U3KQ10	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592863.1	POLRMT-006	501	56aa	ENSP00000473524.2	Nonsense mediated decay		R4GN79	-	-
ENST00000586384.1	POLRMT-005	1326	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587057.1	POLRMT-011	1223	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590709.2	POLRMT-009	851	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588630.1	POLRMT-004	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592633.1	POLRMT-012	460	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589961.1	POLRMT-013	350	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,829 bps, Translation length: 1,230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00411

CCDS

This transcript is a member of the Human CCDS set: CCDS12036

Version

ENST00000588649.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452172 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000588649.2 POLRMT-001

Summary