Transcript: ENST00000491749.1 EFHC1-003

Description

EF-hand domain (C-terminal) containing 1 [Source:HGNC Symbol;Acc:16406]

Gene Synonyms

dJ304B14.2

Location

About this transcript

This transcript has 5 exons, is associated with 4245 variant alleles and maps to 213 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371068.5	EFHC1-001	5470	640aa	ENSP00000360107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4942	B2CKC5 Q5JVL4	NM_018100 NP_060570	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538167.1	EFHC1-202	5445	621aa	ENSP00000444521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55021	Q5JVL4	NM_001172420 NP_001165891	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433625.2	EFHC1-201	2020	550aa	ENSP00000416492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480623.1	EFHC1-002	3442	278aa	ENSP00000434498.1	Nonsense mediated decay		Q5JVL4	-	-
ENST00000491749.1	EFHC1-003	897	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481466.1	EFHC1-004	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 897 bps,

Version

ENST00000491749.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000040907 (version 1)