Transcript: ENST00000338469.3 TREM2-002

Description

triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:17761]

Gene Synonyms

TREM-2, Trem2a, Trem2b, Trem2c

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 2339 variant alleles and maps to 233 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373113.3	TREM2-001	1044	230aa	ENSP00000362205.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4852	E3WHI5 Q5TCX1 Q9NZC2	NM_018965.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373122.4	TREM2-003	1012	222aa	ENSP00000362214.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E3WHI5 Q9NZC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338469.3	TREM2-002	860	219aa	ENSP00000342651.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64422	E3WHI5 Q9NZC2	NM_001271821.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 860 bps, Translation length: 219 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZC2

CCDS

This transcript is a member of the Human CCDS set: CCDS64422

Version

ENST00000338469.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040500 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.