Transcript: ENST00000394886.2 CDC23-001

Description

cell division cycle 23 [Source:HGNC Symbol;Acc:1724]

Gene Synonyms

ANAPC8, APC8, CUT23

Location

Chromosome 5: 137,523,339-137,549,032 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 28 domains and features, is associated with 11136 variant alleles and maps to 587 oligo probes.

Gene

This transcript is a product of gene ENSG00000094880.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394886.2	CDC23-001	3153	597aa	ENSP00000378350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4200	Q9UJX2	NM_004661.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394884.3	CDC23-002	1079	151aa	ENSP00000378348.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UJX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505120.1	CDC23-009	455	123aa	ENSP00000423704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCF8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511383.1	CDC23-008	584	134aa	ENSP00000422902.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483961.2	CDC23-011	549	109aa	ENSP00000422505.1	Nonsense mediated decay		D6RBY8	-	-
ENST00000471692.1	CDC23-003	1104	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482948.1	CDC23-004	737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464806.1	CDC23-006	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475021.1	CDC23-007	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,153 bps, Translation length: 597 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJX2

CCDS

This transcript is a member of the Human CCDS set: CCDS4200

Version

ENST00000394886.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251275 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394886.2 CDC23-001

Summary