Transcript: ENST00000544573.1 TGM1-002

Description

transglutaminase 1 [Source:HGNC Symbol;Acc:11777]

Gene Synonyms

ARCI1, ICR2, KTG, LI, LI1, TGASE, TGK

Location

Chromosome 14: 24,718,414-24,732,386 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 7281 variant alleles and maps to 384 oligo probes.

Gene

This transcript is a product of gene ENSG00000092295.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000206765.6	TGM1-001	2777	817aa	ENSP00000206765.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9622	B4DWR7 H0YKI6 H0YLJ6 H0YLT9 H0YMQ8 H0YN27 H0YNM4 P22735	NM_000359.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544573.1	TGM1-002	1581	375aa	ENSP00000439446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWR7 H0YMQ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559136.1	TGM1-009	898	209aa	ENSP00000453337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLT9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560226.1	TGM1-007	580	42aa	ENSP00000454070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560478.1	TGM1-006	562	50aa	ENSP00000453234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLJ6 H0YNM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558074.1	TGM1-008	555	135aa	ENSP00000453840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKI6 H0YLJ6 H0YN27 H0YNM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560443.1	TGM1-005	527	64aa	ENSP00000452822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKI6 H0YLJ6 H0YNM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561067.1	TGM1-004	469	9aa	ENSP00000452690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559669.1	TGM1-010	412	128aa	ENSP00000453701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMQ8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,581 bps, Translation length: 375 residues

Version

ENST00000544573.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000415398 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000544573.1 TGM1-002

Summary