Transcript: ENST00000263160.3 SLC17A6-001

Description

solute carrier family 17 (vesicular glutamate transporter), member 6 [Source:HGNC Symbol;Acc:16703]

Gene Synonyms

DNPI, VGLUT2

Location

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 21059 variant alleles and maps to 436 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263160.3	SLC17A6-001	3949	582aa	ENSP00000263160.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7856	Q9P2U8	NM_020346.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534115.1	SLC17A6-002	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,949 bps, Translation length: 582 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P2U8

CCDS

This transcript is a member of the Human CCDS set: CCDS7856

Version

ENST00000263160.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387671 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.