Transcript: ENST00000421306.3 PITPNM3-002

Description

PITPNM family member 3 [Source:HGNC Symbol;Acc:21043]

Gene Synonyms

ACKR6, CORD5, NIR1, RDGBA3

Location

About this transcript

This transcript has 19 exons, is annotated with 13 domains and features, is associated with 46478 variant alleles and maps to 666 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262483.8	PITPNM3-001	7086	974aa	ENSP00000262483.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11076	Q9BZ71	NM_031220.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421306.3	PITPNM3-002	6945	938aa	ENSP00000407882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54080	-	NM_001165966.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575201.2	PITPNM3-005	734	116aa	ENSP00000458901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000576664.1	PITPNM3-004	1621	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572795.1	PITPNM3-003	5369	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 6,945 bps, Translation length: 938 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54080

Version

ENST00000421306.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000439815 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.