Transcript: ENST00000393560.1 LAMB1-002

Description

laminin, beta 1 [Source:HGNC Symbol;Acc:6486]

Gene Synonyms

CLM, LIS5

Location

Chromosome 7: 107,599,951-107,643,632 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 47 domains and features, is associated with 20940 variant alleles and maps to 411 oligo probes.

Gene

This transcript is a product of gene ENSG00000091136.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393561.1	LAMB1-003	5766	1810aa	ENSP00000377191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000222399.6	LAMB1-001	5725	1786aa	ENSP00000222399.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5750	E9PCS6 P07942 Q75MC8	NM_002291.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393560.1	LAMB1-002	2806	850aa	ENSP00000377190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EPA6 E9PCS6 Q75MC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439976.1	LAMB1-005	703	183aa	ENSP00000412686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J296	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000393559.1	LAMB1-006	550	91aa	ENSP00000377189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCS6 Q75MC8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474380.1	LAMB1-012	945	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468999.1	LAMB1-009	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476039.1	LAMB1-008	653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468518.1	LAMB1-013	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470995.1	LAMB1-010	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491196.1	LAMB1-011	379	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479448.1	LAMB1-007	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472714.1	LAMB1-004	1540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,806 bps, Translation length: 850 residues

Version

ENST00000393560.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000314585 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000393560.1 LAMB1-002

Summary