Transcript: ENST00000388780.3 LAMB4-201

Description

laminin, beta 4 [Source:HGNC Symbol;Acc:6491]

Location

Chromosome 7: 107,667,335-107,770,801 reverse strand.

About this transcript

This transcript has 34 exons, is annotated with 105 domains and features, is associated with 44294 variant alleles and maps to 789 oligo probes.

Gene

This transcript is a product of gene ENSG00000091128.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388781.3	LAMB4-202	5858	1761aa	ENSP00000373433.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34732	A4D0S4 C9JM08	NM_007356.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000205386.4	LAMB4-001	5857	1761aa	ENSP00000205386.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34732	A4D0S4 C9JM08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388780.3	LAMB4-201	5256	1723aa	ENSP00000373432.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4D0S4 C9JM08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418464.1	LAMB4-003	2600	772aa	ENSP00000402353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM08 C9JMJ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422975.1	LAMB4-004	2579	749aa	ENSP00000416562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4D0S4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414450.2	LAMB4-203	2403	772aa	ENSP00000402265.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM08 C9JMJ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483484.1	LAMB4-007	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475572.1	LAMB4-006	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475469.1	LAMB4-002	3670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471677.1	LAMB4-005	920	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 34, Coding exons: 33, Transcript length: 5,256 bps, Translation length: 1,723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A4D0S4

Version

ENST00000388780.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Stop codons

This transcript has a variant, rs1735499, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-LWK.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000388780.3 LAMB4-201

Summary