Transcript: ENST00000404025.2 NLRC4-001

Description

NLR family, CARD domain containing 4 [Source:HGNC Symbol;Acc:16412]

Gene Synonyms

CARD12, CLAN, CLAN1, CLANA, CLANB, CLANC, CLAND, CLR2.1, IPAF, ipaf

Location

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 20815 variant alleles and maps to 369 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000404025.2	NLRC4-001	3581	1024aa	ENSP00000385090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33174	Q9NPP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360906.5	NLRC4-002	3359	1024aa	ENSP00000354159.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33174	Q9NPP4	NM_021209.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402280.1	NLRC4-004	3355	1024aa	ENSP00000385428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33174	Q9NPP4	NM_001199138.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342905.6	NLRC4-003	1362	359aa	ENSP00000339666.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NPP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 3,581 bps, Translation length: 1,024 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPP4

CCDS

This transcript is a member of the Human CCDS set: CCDS33174

Version

ENST00000404025.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325222 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.