Transcript: ENST00000346134.7 EXOC1-001

Description

exocyst complex component 1 [Source:HGNC Symbol;Acc:30380]

Gene Synonyms

BM-102, FLJ10893, SEC3, SEC3L1, SEC3P, Sec3p

Location

Chromosome 4: 56,719,841-56,771,200 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 9 domains and features, is associated with 20881 variant alleles and maps to 591 oligo probes.

Gene

This transcript is a product of gene ENSG00000090989.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381295.2	EXOC1-003	3551	894aa	ENSP00000370695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3502	Q9NV70	NM_001024924.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346134.7	EXOC1-001	3357	894aa	ENSP00000326514.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3502	Q9NV70	NM_018261.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349598.6	EXOC1-002	3248	879aa	ENSP00000334431.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3503	Q9NV70	NM_178237.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511971.1	EXOC1-006	3203	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505501.1	EXOC1-004	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506936.1	EXOC1-009	647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509302.1	EXOC1-007	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504321.1	EXOC1-008	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,357 bps, Translation length: 894 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NV70

CCDS

This transcript is a member of the Human CCDS set: CCDS3502

Version

ENST00000346134.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000220010 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000346134.7 EXOC1-001

Summary