Transcript: ENST00000587238.1 GMIP-002

Description

GEM interacting protein [Source:HGNC Symbol;Acc:24852]

Gene Synonyms

ARHGAP46

Location

Chromosome 19: 19,740,652-19,754,370 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 23 domains and features, is associated with 6908 variant alleles and maps to 527 oligo probes.

Gene

This transcript is a product of gene ENSG00000089639.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000203556.4	GMIP-001	3538	970aa	ENSP00000203556.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12408	K7EQR5 Q9P107	NM_016573.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445806.2	GMIP-201	3034	941aa	ENSP00000397075.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ERB7 K7EQR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587238.1	GMIP-002	2987	944aa	ENSP00000467054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZLZ0 K7EQR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593186.1	GMIP-005	910	303aa	ENSP00000465108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587205.1	GMIP-008	594	94aa	ENSP00000467946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQR5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588171.1	GMIP-003	869	36aa	ENSP00000468662.1	Nonsense mediated decay		K7ELE8	-	-
ENST00000591047.1	GMIP-004	747	36aa	ENSP00000466045.1	Nonsense mediated decay		K7ELE8	-	-
ENST00000586269.1	GMIP-006	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587713.1	GMIP-007	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,987 bps, Translation length: 944 residues

Version

ENST00000587238.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460552 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000587238.1 GMIP-002

Summary