Transcript: ENST00000556686.1 NID2-008

Description

nidogen 2 (osteonidogen) [Source:HGNC Symbol;Acc:13389]

Gene Synonyms

NID-2

Location

Chromosome 14: 52,471,934-52,474,642 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1556 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSG00000087303.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216286.5	NID2-001	4811	1375aa	ENSP00000216286.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9706	Q14112	NM_007361.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541773.1	NID2-201	4508	1274aa	ENSP00000443730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DPX8 Q14112	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556572.1	NID2-004	1964	644aa	ENSP00000452190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DPX8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000556686.1	NID2-008	1320	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554284.1	NID2-003	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553297.1	NID2-006	798	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555310.1	NID2-007	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557051.1	NID2-005	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,320 bps,

Version

ENST00000556686.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411605 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000556686.1 NID2-008

Summary