Transcript: ENST00000199706.8 MRPL28-006

Description

mitochondrial ribosomal protein L28 [Source:HGNC Symbol;Acc:14484]

Gene Synonyms

MAAT1, p15

Location

Chromosome 16: 417,384-420,527 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 2548 variant alleles and maps to 443 oligo probes.

Gene

This transcript is a product of gene ENSG00000086504.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000199706.8	MRPL28-006	1098	256aa	ENSP00000199706.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32349	A2IDC6 A2IDC7 Q13084 Q4TT37	NM_006428.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389675.2	MRPL28-008	865	256aa	ENSP00000374326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32349	A2IDC6 A2IDC7 Q13084 Q4TT37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441883.1	MRPL28-010	800	240aa	ENSP00000398684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2IDC6 A2IDC7 Q4TT37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447696.1	MRPL28-009	722	218aa	ENSP00000390399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2IDC7 Q4TT37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450882.1	MRPL28-011	619	194aa	ENSP00000395305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2IDC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429738.1	MRPL28-012	310	48aa	ENSP00000414038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2IDC5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481453.1	MRPL28-002	2229	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483764.1	MRPL28-004	1502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461550.1	MRPL28-007	1478	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469744.1	MRPL28-003	1467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,098 bps, Translation length: 256 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13084

CCDS

This transcript is a member of the Human CCDS set: CCDS32349

Version

ENST00000199706.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000139285 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000199706.8 MRPL28-006

Summary