Transcript: ENST00000371984.3 POMGNT1-001

Description

protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:19139]

Gene Synonyms

FLJ20277, GNTI.2, GnT I.2, LGMD2O, MDDGA3, MDDGB3, MDDGC3, MEB, MGAT1.2, gnT-I.2

Location

Chromosome 1: 46,654,355-46,664,115 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 7 domains and features, is associated with 5040 variant alleles and maps to 1014 oligo probes.

Gene

This transcript is a product of gene ENSG00000085998.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396420.3	POMGNT1-202	3480	200aa	ENSP00000379698.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68CV6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371992.1	POMGNT1-002	2934	748aa	ENSP00000361060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57995	Q5VST3	NM_001243766.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371984.3	POMGNT1-001	2728	660aa	ENSP00000361052.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS531	Q8WZA1	NM_017739.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371986.3	POMGNT1-201	2388	748aa	ENSP00000361054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57995	Q5VST3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535522.1	POMGNT1-203	2355	638aa	ENSP00000443767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H827	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485714.1	POMGNT1-004	2906	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489985.1	POMGNT1-003	1094	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497439.1	POMGNT1-008	846	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477114.1	POMGNT1-009	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463030.1	POMGNT1-007	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480972.1	POMGNT1-006	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475642.1	POMGNT1-005	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 2,728 bps, Translation length: 660 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WZA1

CCDS

This transcript is a member of the Human CCDS set: CCDS531

Version

ENST00000371984.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000020146 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000371984.3 POMGNT1-001

Summary