Transcript: ENST00000405141.1 NCOA1-002

Description

nuclear receptor coactivator 1 [Source:HGNC Symbol;Acc:7668]

Gene Synonyms

BHLHE74, F-SRC-1, KAT13A, NCoA-1, RIP160, SRC1, bHLHe42, bHLHe74

Location

Chromosome 2: 24,714,927-24,993,571 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 33 domains and features, is associated with 116317 variant alleles and maps to 1058 oligo probes.

Gene

This transcript is a product of gene ENSG00000084676.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405141.1	NCOA1-002	7405	1399aa	ENSP00000385097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1713	B5MCN7 Q15788	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406961.1	NCOA1-001	7289	1441aa	ENSP00000385216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1712	Q15788	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288599.5	NCOA1-201	6952	1399aa	ENSP00000288599.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1713	B5MCN7 Q15788	NM_147223.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348332.3	NCOA1-202	6895	1441aa	ENSP00000320940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1712	Q15788	NM_147233.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395856.3	NCOA1-003	6828	1440aa	ENSP00000379197.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42660	Q15788	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407230.1	NCOA1-009	4745	1248aa	ENSP00000385195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538539.1	NCOA1-203	4597	1399aa	ENSP00000444039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1713	B5MCN7 Q15788	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469850.1	NCOA1-004	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496333.1	NCOA1-007	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486198.1	NCOA1-010	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483904.1	NCOA1-008	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493773.1	NCOA1-011	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 19, Transcript length: 7,405 bps, Translation length: 1,399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15788

CCDS

This transcript is a member of the Human CCDS set: CCDS1713

Version

ENST00000405141.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000246853 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405141.1 NCOA1-002

Summary