Transcript: ENST00000510746.1 YTHDC1-004

Description

YTH domain containing 1 [Source:HGNC Symbol;Acc:30626]

Gene Synonyms

KIAA1966, YT521, YT521-B

Location

Chromosome 4: 69,203,558-69,215,763 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 5859 variant alleles and maps to 295 oligo probes.

Gene

This transcript is a product of gene ENSG00000083896.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344157.4	YTHDC1-001	6232	727aa	ENSP00000339245.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33992	J3KS01 Q96MU7	NM_001031732.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355665.3	YTHDC1-002	3244	709aa	ENSP00000347888.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3522	J3KS01 Q96MU7	NM_133370.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579690.1	YTHDC1-007	2983	735aa	ENSP00000463982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KS01 J3QR07	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507529.1	YTHDC1-005	689	93aa	ENSP00000461990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510746.1	YTHDC1-004	515	12aa	ENSP00000462186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505251.1	YTHDC1-003	265	37aa	ENSP00000462238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KS01	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506175.1	YTHDC1-006	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 515 bps, Translation length: 12 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000510746.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362079 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000510746.1 YTHDC1-004

Summary