Transcript: ENST00000409143.1 MPP4-007

Description

membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) [Source:HGNC Symbol;Acc:13680]

Gene Synonyms

ALS2CR5, DLG6

Location

Chromosome 2: 202,509,828-202,562,791 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 24 domains and features, is associated with 22261 variant alleles and maps to 434 oligo probes.

Gene

This transcript is a product of gene ENSG00000082126.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409474.3	MPP4-001	2462	637aa	ENSP00000387278.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46491	Q96JB8	NM_033066.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359962.5	MPP4-201	2457	637aa	ENSP00000353047.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WDZ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315506.7	MPP4-002	2330	593aa	ENSP00000319363.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96JB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428900.2	MPP4-009	2320	613aa	ENSP00000416781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ET46	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396886.3	MPP4-008	2250	562aa	ENSP00000380095.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PG92	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409143.1	MPP4-007	2082	579aa	ENSP00000387293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6Q0Y6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447335.2	MPP4-010	2050	630aa	ENSP00000406160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602867.1	MPP4-012	540	171aa	ENSP00000473500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GN59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000409818.3	MPP4-011	1760	434aa	ENSP00000386580.3	Nonsense mediated decay		F8WBH8 R4GN59	-	-
ENST00000486212.2	MPP4-004	2220	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483841.2	MPP4-006	1715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,082 bps, Translation length: 579 residues

Version

ENST00000409143.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000335779 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409143.1 MPP4-007

Summary