Transcript: ENST00000443831.1 LRP2-005

Description

low density lipoprotein receptor-related protein 2 [Source:HGNC Symbol;Acc:6694]

Gene Synonyms

DBS, GP330, gp330

Location

About this transcript

This transcript has 23 exons, is annotated with 137 domains and features, is associated with 56338 variant alleles and maps to 518 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263816.3	LRP2-001	15808	4655aa	ENSP00000263816.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2232	P98164 Q4ZG84 Q53TL0 Q9NP34	NM_004525.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000443831.1	LRP2-005	4007	1225aa	ENSP00000409813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PC35 Q9NP34	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461418.1	LRP2-003	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493501.1	LRP2-002	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491228.1	LRP2-004	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,007 bps, Translation length: 1,225 residues

Version

ENST00000443831.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000337306 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.