Transcript: ENST00000483083.1 SRCAP-003

Description

Snf2-related CREBBP activator protein [Source:HGNC Symbol;Acc:16974]

Gene Synonyms

DOMO1, EAF1, FLHS, KIAA0309, SWR1

Location

Chromosome 16: 30,721,217-30,736,689 forward strand.

About this transcript

This transcript has 18 exons, is associated with 8744 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSG00000080603.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262518.4	SRCAP-001	10474	3230aa	ENSP00000262518.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10689	C9J4U4 G1UI29 Q6ZRS2	NM_006662.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395059.2	SRCAP-202	10287	3168aa	ENSP00000378499.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U4 G1UI29 Q6ZRS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344771.4	SRCAP-201	9999	3072aa	ENSP00000343042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U4 Q6ZRS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411466.2	SRCAP-004	836	100aa	ENSP00000405186.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000380361.3	SRCAP-002	10804	3053aa	ENSP00000369719.3	Nonsense mediated decay		Q6ZRS2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483083.1	SRCAP-003	5043	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474008.1	SRCAP-006	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 0, Transcript length: 5,043 bps,

Version

ENST00000483083.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341713 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000483083.1 SRCAP-003

Summary