Transcript: ENST00000262518.4 SRCAP-001

Description

Snf2-related CREBBP activator protein [Source:HGNC Symbol;Acc:16974]

Gene Synonyms

DOMO1, EAF1, FLHS, KIAA0309, SWR1

Location

Chromosome 16: 30,710,462-30,751,450 forward strand.

About this transcript

This transcript has 34 exons, is annotated with 77 domains and features, is associated with 22649 variant alleles and maps to 1192 oligo probes.

Gene

This transcript is a product of gene ENSG00000080603.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262518.4	SRCAP-001	10474	3230aa	ENSP00000262518.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10689	C9J4U4 G1UI29 Q6ZRS2	NM_006662.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395059.2	SRCAP-202	10287	3168aa	ENSP00000378499.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U4 G1UI29 Q6ZRS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344771.4	SRCAP-201	9999	3072aa	ENSP00000343042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U4 Q6ZRS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411466.2	SRCAP-004	836	100aa	ENSP00000405186.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000380361.3	SRCAP-002	10804	3053aa	ENSP00000369719.3	Nonsense mediated decay		Q6ZRS2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483083.1	SRCAP-003	5043	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474008.1	SRCAP-006	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 34, Coding exons: 32, Transcript length: 10,474 bps, Translation length: 3,230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZRS2

CCDS

This transcript is a member of the Human CCDS set: CCDS10689

Version

ENST00000262518.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255523 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000262518.4 SRCAP-001

Summary