Description
SP140 nuclear body protein [Source:HGNC Symbol;Acc:17133]
Gene Synonyms
LYSP100, LYSP100-A, LYSP100-B
Location
Chromosome 2: 231,090,445-231,223,762 forward strand.
About this transcript
This transcript has 26 exons, is annotated with 27 domains and features, is associated with 55525 variant alleles and maps to 729 oligo probes.
Gene
This transcript is a product of gene ENSG00000079263.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000392045.3 | SP140-002 | 3246 | 867aa | ENSP00000375899.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42831 | Q13342 | NM_007237.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000420434.3 | SP140-202 | 3009 | 840aa | ENSP00000398210.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63150 | E7EUR5 | NM_001278451.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000350136.5 | SP140-201 | 2917 | 736aa | ENSP00000345846.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W6B8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000343805.6 | SP140-009 | 2910 | 807aa | ENSP00000342096.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63151 | E9PFJ6 | NM_001278452.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000417495.3 | SP140-004 | 2895 | 753aa | ENSP00000393618.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63149 | E7ESH9 | NM_001278453.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000486687.2 | SP140-203 | 2639 | 768aa | ENSP00000440107.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GY84 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000373645.3 | SP140-003 | 814 | 172aa | ENSP00000362749.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33392 | Q13342 | NM_001005176.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000456542.1 | SP140-015 | 580 | 29aa | ENSP00000475284.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KPV9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544128.1 | SP140-011 | 910 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000538494.1 | SP140-012 | 629 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000441657.1 | SP140-014 | 387 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473711.1 | SP140-008 | 644 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000543928.1 | SP140-010 | 640 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479539.1 | SP140-005 | 550 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486750.1 | SP140-007 | 537 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476126.1 | SP140-006 | 463 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |