Human (GRCh37.p13)
Description

SP140 nuclear body protein [Source:HGNC Symbol;Acc:17133]

Gene Synonyms

LYSP100, LYSP100-A, LYSP100-B

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 5410 variant alleles and maps to 193 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000392045.3SP140-0023246867aaENSP00000375899.3
 
Protein coding
CCDS42831Q13342 NM_007237.4GENCODE basic
ENST00000420434.3SP140-2023009840aaENSP00000398210.3
 
Protein coding
CCDS63150E7EUR5 NM_001278451.1GENCODE basic
ENST00000350136.5SP140-2012917736aaENSP00000345846.5
 
Protein coding
F8W6B8 -GENCODE basic
ENST00000343805.6SP140-0092910807aaENSP00000342096.6
 
Protein coding
CCDS63151E9PFJ6 NM_001278452.1GENCODE basic
ENST00000417495.3SP140-0042895753aaENSP00000393618.3
 
Protein coding
CCDS63149E7ESH9 NM_001278453.1GENCODE basic
ENST00000486687.2SP140-2032639768aaENSP00000440107.1
 
Protein coding
F5GY84 -GENCODE basic
ENST00000373645.3SP140-003814172aaENSP00000362749.3
 
Protein coding
CCDS33392Q13342 NM_001005176.2GENCODE basic
ENST00000456542.1SP140-01558029aaENSP00000475284.1
 
Protein coding
U3KPV9 -CDS 3' incomplete
ENST00000544128.1SP140-011910No protein-
 
Processed transcript
---
ENST00000538494.1SP140-012629No protein-
 
Processed transcript
---
ENST00000441657.1SP140-014387No protein-
 
Processed transcript
---
ENST00000473711.1SP140-008644No protein-
 
Retained intron
---
ENST00000543928.1SP140-010640No protein-
 
Retained intron
---
ENST00000479539.1SP140-005550No protein-
 
Retained intron
---
ENST00000486750.1SP140-007537No protein-
 
Retained intron
---
ENST00000476126.1SP140-006463No protein-
 
Retained intron
---
Statistics

Exons: 4, Coding exons: 4, Transcript length: 814 bps, Translation length: 172 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13342

CCDS

This transcript is a member of the Human CCDS set: CCDS33392

Version

ENST00000373645.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000332016 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.