Transcript: ENST00000392132.2 XRCC5-201

Description

X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) [Source:HGNC Symbol;Acc:12833]

Gene Synonyms

G22P2, KARP-1, KARP1, KU80, KUB2, Ku86, NFIV

Location

Chromosome 2: 216,974,020-217,071,014 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 17 domains and features, is associated with 43143 variant alleles and maps to 807 oligo probes.

Gene

This transcript is a product of gene ENSG00000079246.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392133.3	XRCC5-001	3761	732aa	ENSP00000375978.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2402	C9JZ81 P13010 Q53T09 Q53TC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392132.2	XRCC5-201	3428	732aa	ENSP00000375977.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2402	C9JZ81 P13010 Q53T09 Q53TC2	NM_021141.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417391.1	XRCC5-003	605	131aa	ENSP00000401318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZ81	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451695.1	XRCC5-006	415	19aa	ENSP00000395108.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000471649.1	XRCC5-008	610	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000429133.1	XRCC5-005	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460284.1	XRCC5-010	2962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485763.1	XRCC5-009	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476360.1	XRCC5-004	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493706.1	XRCC5-007	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,428 bps, Translation length: 732 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13010

CCDS

This transcript is a member of the Human CCDS set: CCDS2402

Version

ENST00000392132.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000392132.2 XRCC5-201

Summary