Transcript: ENST00000441628.1 AMPH-003

Description

amphiphysin [Source:HGNC Symbol;Acc:471]

Gene Synonyms

AMPH1

Location

Chromosome 7: 38,424,419-38,502,713 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 34464 variant alleles and maps to 401 oligo probes.

Gene

This transcript is a product of gene ENSG00000078053.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356264.2	AMPH-001	3418	695aa	ENSP00000348602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5456	P49418 Q9UQI2 Q9UQI3 Q9UQI4 Q9UQI5	NM_001635.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325590.5	AMPH-002	3145	653aa	ENSP00000317441.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47574	P49418 Q9UQI2 Q9UQI3 Q9UQI5	NM_139316.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428293.2	AMPH-201	3143	653aa	ENSP00000390734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H533 Q9UQI2 Q9UQI3 Q9UQI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441628.1	AMPH-003	1735	578aa	ENSP00000415085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UQI3 Q9UQI5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450124.1	AMPH-006	665	112aa	ENSP00000400404.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000471913.1	AMPH-004	1778	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467580.1	AMPH-005	866	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460887.1	AMPH-009	430	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462072.1	AMPH-007	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475581.1	AMPH-008	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,735 bps, Translation length: 578 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000441628.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338409 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000441628.1 AMPH-003

Summary