Transcript: ENST00000444748.1 FSCN1-003

Description

fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) [Source:HGNC Symbol;Acc:11148]

Gene Synonyms

FAN1, FLJ38511, HSN, SNL, p55

Location

Chromosome 7: 5,633,479-5,643,614 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 5987 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSG00000075618.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382361.3	FSCN1-001	2777	493aa	ENSP00000371798.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5342	B3KTM9 C9JFC0 C9JPH9 H7BYX5 Q16658 Q96IH1	NM_003088.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340250.6	FSCN1-201	2722	472aa	ENSP00000339729.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KTM9 C9JFC0 C9JPH9 H7BYX5 J3KNT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447103.1	FSCN1-004	713	120aa	ENSP00000409967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPH9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444748.1	FSCN1-003	580	132aa	ENSP00000404506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFC0 C9JPH9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000405801.2	FSCN1-005	550	137aa	ENSP00000383982.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFC0 C9JPH9 H7BYX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473330.1	FSCN1-002	2215	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 580 bps, Translation length: 132 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000444748.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324033 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000444748.1 FSCN1-003

Summary