Transcript: ENST00000541377.1 CLASP1-204

Description

cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:17088]

Gene Synonyms

KIAA0622, MAST1

Location

Chromosome 2: 122,095,354-122,407,052 reverse strand.

About this transcript

This transcript has 39 exons, is annotated with 29 domains and features, is associated with 133156 variant alleles and maps to 1084 oligo probes.

Gene

This transcript is a product of gene ENSG00000074054.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000263710.4	CLASP1-201	8090	1538aa	ENSP00000263710.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9J151 C9JP76 Q7Z460	NM_015282.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409078.3	CLASP1-001	8002	1471aa	ENSP00000386442.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z7C4 C9J151 C9JP76 Q68D09 Q6TAR3 Q7Z460	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455322.2	CLASP1-203	7958	1494aa	ENSP00000389372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z7C4 C9J151 C9JP76 F8WA11 Q68D09 Q6TAR3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397587.3	CLASP1-202	7910	1478aa	ENSP00000380717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RU21 B7Z7C4 C9J151 C9JP76 F5GWS0 Q68D09	NM_001142274.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541377.1	CLASP1-204	7907	1477aa	ENSP00000441625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z7C4 B7ZLX3 C9J151 C9JP76 Q68D09	NM_001207051.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541859.1	CLASP1-205	6851	1255aa	ENSP00000441770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z7C4 F5GWM7 Q68D09 Q6TAR3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545861.1	CLASP1-206	3942	1245aa	ENSP00000438620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z7C4 F5H2E2 Q68D09	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418989.1	CLASP1-012	663	150aa	ENSP00000392886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9J151 C9JP76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449975.1	CLASP1-013	555	110aa	ENSP00000402101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JP76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463621.2	CLASP1-003	536	178aa	ENSP00000447929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YHV8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000452274.2	CLASP1-016	3967	704aa	ENSP00000400562.2	Nonsense mediated decay	C9J151 C9JP76 Q6TAR3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000430234.1	CLASP1-014	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000480007.1	CLASP1-011	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000472776.1	CLASP1-004	1982	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000485112.1	CLASP1-009	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000491646.1	CLASP1-015	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000474065.1	CLASP1-010	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 39, Coding exons: 38, Transcript length: 7,907 bps, Translation length: 1,477 residues

Version

ENST00000541377.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000541377.1 CLASP1-204

Summary