Transcript: ENST00000505555.1 SDHA-003

Description

succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:HGNC Symbol;Acc:10680]

Gene Synonyms

CMD1GG, FP, PGL5, SDH1, SDH2, SDHF

Location

Chromosome 5: 218,431-251,979 forward strand.

About this transcript

This transcript has 13 exons, is associated with 17881 variant alleles and maps to 831 oligo probes.

Gene

This transcript is a product of gene ENSG00000073578.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264932.6	SDHA-001	2390	664aa	ENSP00000264932.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3853	B3KT34 P31040 Q0QF12	NM_004168.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510361.1	SDHA-004	2148	616aa	ENSP00000427703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KT34 E9PBJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504309.1	SDHA-002	2067	583aa	ENSP00000426514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515815.1	SDHA-017	704	126aa	ENSP00000422404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509564.1	SDHA-018	630	101aa	ENSP00000421911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y8S2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509632.1	SDHA-010	583	89aa	ENSP00000425077.1	Nonsense mediated decay		D6REB7	-	-
ENST00000507522.1	SDHA-019	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514233.1	SDHA-013	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509082.1	SDHA-020	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511810.1	SDHA-006	3001	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503674.1	SDHA-005	2426	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505555.1	SDHA-003	2230	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514027.1	SDHA-008	2209	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515752.1	SDHA-007	1809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504824.1	SDHA-009	1430	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512962.1	SDHA-014	935	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502379.1	SDHA-011	679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509420.1	SDHA-015	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507266.1	SDHA-021	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 0, Transcript length: 2,230 bps,

Version

ENST00000505555.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367625 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000505555.1 SDHA-003

Summary