In the first quarter of 2020 we will be removing all data other than for human from this archive website. Please read our blog post for full details.

Description

structural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:11111]

Gene Synonyms

CDLS2, DXS423E, KIAA0178, SB1.8, SMC1, SMC1L1, SMC1alpha, SMCB, Smcb

Location
About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 879 variant alleles and maps to 122 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SMC1A-001ENST00000322213.497841233aaENSP00000323421.3
 
Protein coding
CCDS14352Q14683 NM_001281463
NM_006306
NP_001268392
NP_006297
GENCODE basic
SMC1A-201ENST00000375340.61761516aaENSP00000364489.6
 
Protein coding
-G8JLG1 -GENCODE basic
SMC1A-003ENST00000428014.1868262aaENSP00000413509.2
 
Protein coding
-H0Y7K8 Q5H934 -CDS 3' incomplete
SMC1A-005ENST00000470241.2838279aaENSP00000476416.1
 
Protein coding
---CDS 5' and 3' incomplete
SMC1A-002ENST00000463684.188054aaENSP00000476958.1
 
Nonsense mediated decay
----
SMC1A-004ENST00000469129.1847No protein-
 
Processed transcript
----
Statistics

Exons: 4, Coding exons: 2, Transcript length: 880 bps, Translation length: 54 residues

Version

ENST00000463684.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000056757 (version 2)

Transcript-based displays