Transcript: ENST00000369762.2 ATP6AP1-001

Description

ATPase, H+ transporting, lysosomal accessory protein 1 [Source:HGNC Symbol;Acc:868]

Gene Synonyms

16A, ATP6IP1, ATP6S1, Ac45, CF2, ORF, VATPS1, XAP-3, XAP3

Location

Chromosome X: 153,656,978-153,664,862 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 2895 variant alleles and maps to 552 oligo probes.

Gene

This transcript is a product of gene ENSG00000071553.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369762.2	ATP6AP1-001	2099	470aa	ENSP00000358777.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35451	Q15904 Q9H0C7	NM_001183.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422890.1	ATP6AP1-003	867	273aa	ENSP00000398511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NLC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449556.1	ATP6AP1-010	720	230aa	ENSP00000392375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6QRJ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455205.1	ATP6AP1-002	4515	133aa	ENSP00000396643.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429585.1	ATP6AP1-006	769	128aa	ENSP00000408470.1	Nonsense mediated decay		H7C2Y8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000439372.1	ATP6AP1-007	604	134aa	ENSP00000408317.1	Nonsense mediated decay		F2Z3L8	-	-
ENST00000446552.1	ATP6AP1-008	571	134aa	ENSP00000411209.1	Nonsense mediated decay		F2Z3L8	-	-
ENST00000484908.1	ATP6AP1-009	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491569.1	ATP6AP1-004	2079	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,099 bps, Translation length: 470 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15904

CCDS

This transcript is a member of the Human CCDS set: CCDS35451

Version

ENST00000369762.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000081639 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000369762.2 ATP6AP1-001

Summary