Transcript: ENST00000166345.3 TRIP13-001

Description

thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:12307]

Gene Synonyms

16E1BP, PCH2

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 10919 variant alleles and maps to 675 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000166345.3	TRIP13-001	2672	432aa	ENSP00000166345.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3858	Q15645	NM_004237.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513435.1	TRIP13-006	746	249aa	ENSP00000427528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510412.1	TRIP13-003	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508456.1	TRIP13-007	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508430.1	TRIP13-005	306	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509210.1	TRIP13-004	303	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512024.1	TRIP13-002	1452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,672 bps, Translation length: 432 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15645

CCDS

This transcript is a member of the Human CCDS set: CCDS3858

Version

ENST00000166345.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206721 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.