Transcript: ENST00000261797.6 NDST1-002

Description

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 [Source:HGNC Symbol;Acc:7680]

Gene Synonyms

HSST, HSST1, NST1

Location

Chromosome 5: 149,887,674-149,937,773 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 9 domains and features, is associated with 21566 variant alleles and maps to 689 oligo probes.

Gene

This transcript is a product of gene ENSG00000070614.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261797.6	NDST1-002	8030	882aa	ENSP00000261797.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34277	E5RG24 E5RG58 E5RGN9 P52848	NM_001543.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523767.1	NDST1-001	3449	825aa	ENSP00000428604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG24 E5RG58 E5RGN9 E7EVJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522491.1	NDST1-007	777	68aa	ENSP00000429966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG24 E5RGN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518299.1	NDST1-004	769	23aa	ENSP00000430258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG24	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519157.1	NDST1-008	576	159aa	ENSP00000427813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG24 E5RG58 E5RGN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521752.1	NDST1-006	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518346.1	NDST1-010	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524161.1	NDST1-009	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 8,030 bps, Translation length: 882 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52848

CCDS

This transcript is a member of the Human CCDS set: CCDS34277

Version

ENST00000261797.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374314 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261797.6 NDST1-002

Summary