Transcript: ENST00000589459.1 WIPI1-003

Description

WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:25471]

Gene Synonyms

ATG18, ATG18A, Atg18, FLJ10055, WIPI49

Location

Chromosome 17: 66,417,450-66,453,640 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 15201 variant alleles and maps to 483 oligo probes.

Gene

This transcript is a product of gene ENSG00000070540.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262139.5	WIPI1-002	1832	446aa	ENSP00000262139.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11677	G5EA37 Q5MNZ9	NM_017983.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546360.1	WIPI1-004	1575	364aa	ENSP00000437345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5EA37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591744.1	WIPI1-010	742	205aa	ENSP00000466270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELY0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585393.1	WIPI1-011	494	54aa	ENSP00000465557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589316.1	WIPI1-001	1886	369aa	ENSP00000465470.1	Nonsense mediated decay		K7EK57	-	-
ENST00000592645.1	WIPI1-012	624	82aa	ENSP00000465695.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589459.1	WIPI1-003	1804	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591494.1	WIPI1-006	828	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586815.1	WIPI1-005	780	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587731.1	WIPI1-007	829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590402.1	WIPI1-009	685	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 1,804 bps,

Version

ENST00000589459.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448740 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000589459.1 WIPI1-003

Summary