Transcript: ENST00000458188.2 CLTCL1-012

Description

clathrin, heavy chain-like 1 [Source:HGNC Symbol;Acc:2093]

Gene Synonyms

CHC22, CLH22, CLTCL, CLTD

Location

Chromosome 22: 19,209,096-19,213,843 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 2126 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSG00000070371.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263200.10	CLTCL1-001	5513	1640aa	ENSP00000445677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46662	P53675	NM_007098.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427926.1	CLTCL1-201	5512	1640aa	ENSP00000441158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P53675	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353891.5	CLTCL1-002	5313	1583aa	ENSP00000439662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54497	P53675	NM_001835.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449918.1	CLTCL1-004	582	169aa	ENSP00000443264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5N6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505027.2	CLTCL1-008	4859	1260aa	ENSP00000424145.2	Nonsense mediated decay		J3KR87	-	-
ENST00000458188.2	CLTCL1-012	574	43aa	ENSP00000396140.2	Nonsense mediated decay		H0Y529	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538828.1	CLTCL1-013	448	67aa	ENSP00000443582.1	Nonsense mediated decay		H0YGJ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000442042.2	CLTCL1-009	1714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536806.1	CLTCL1-010	1695	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000413132.2	CLTCL1-007	4994	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000412649.1	CLTCL1-003	4635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540896.1	CLTCL1-011	477	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 574 bps, Translation length: 43 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000458188.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398428 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000458188.2 CLTCL1-012

Summary