Human (GRCh37.p13)
Description

SMG6 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:17809]

Gene Synonyms

C17orf31, EST1A, KIAA0732, SMG-6, hSMG5/7a

Location
About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 24129 variant alleles and maps to 66 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000544865.1SMG6-20163311388aaENSP00000443920.1
 
Protein coding
I3L176 I3L1W8 I3L355
I3L3A9 I3L421 K7EKV2
K7ELM2 K7ENH7 Q86US8
-GENCODE basic
ENST00000263073.6SMG6-00159601419aaENSP00000263073.5
 
Protein coding
CCDS11016I3L176 I3L1W8 I3L355
I3L3A9 I3L421 K7EKV2
K7ELM2 K7ENH7 Q86US8
NM_017575.4GENCODE basic
ENST00000354901.4SMG6-0023473511aaENSP00000346977.4
 
Protein coding
CCDS58498I3L176 I3L1W8 I3L355
I3L3A9 I3L421 K7EKV2
K7ELM2 K7ENH7 Q86US8
NM_001256827.1GENCODE basic
ENST00000536871.2SMG6-0051865511aaENSP00000440283.2
 
Protein coding
CCDS58498I3L176 I3L1W8 I3L355
I3L3A9 I3L421 K7EKV2
K7ELM2 K7ENH7 Q86US8
NM_001256828.1GENCODE basic
ENST00000572369.1SMG6-008689138aaENSP00000465793.1
 
Protein coding
K7EKV2 K7ELM2 K7ENH7
-CDS 3' incomplete
ENST00000575454.1SMG6-010652208aaENSP00000460273.2
 
Protein coding
I3L390 -CDS 3' incomplete
ENST00000570659.1SMG6-019592163aaENSP00000460898.1
 
Protein coding
I3L176 I3L355 I3L3A9
I3L421
-CDS 3' incomplete
ENST00000571442.1SMG6-015588164aaENSP00000459164.1
 
Protein coding
I3L176 I3L1W8 I3L355
I3L3A9 I3L421
-CDS 3' incomplete
ENST00000575663.1SMG6-014574162aaENSP00000458635.1
 
Protein coding
I3L176 I3L355 I3L3A9
-CDS 3' incomplete
ENST00000570606.1SMG6-021572123aaENSP00000460191.1
 
Protein coding
I3L355 I3L3A9 -CDS 3' incomplete
ENST00000575176.1SMG6-009557124aaENSP00000466139.1
 
Protein coding
K7ELM2 K7ENH7 -CDS 3' incomplete
ENST00000572205.1SMG6-018551115aaENSP00000466951.1
 
Protein coding
K7ENH7 -CDS 3' incomplete
ENST00000570668.1SMG6-013547119aaENSP00000460301.1
 
Protein coding
I3L3A9 -CDS 3' incomplete
ENST00000573166.1SMG6-0034236No protein-
 
Processed transcript
---
ENST00000570756.1SMG6-0042426No protein-
 
Processed transcript
---
ENST00000576218.1SMG6-020902No protein-
 
Processed transcript
---
ENST00000573827.1SMG6-023601No protein-
 
Processed transcript
---
ENST00000573153.1SMG6-012552No protein-
 
Processed transcript
---
ENST00000575338.1SMG6-007546No protein-
 
Processed transcript
---
ENST00000574501.1SMG6-0222419No protein-
 
Retained intron
---
ENST00000570874.1SMG6-011533No protein-
 
Retained intron
---
Statistics

Exons: 4, Coding exons: 3, Transcript length: 547 bps, Translation length: 119 residues

Incomplete CDS

CDS 3' incomplete

Version

ENST00000570668.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000438483 (version 1)