Transcript: ENST00000372396.3 KDM4A-001

Description

lysine (K)-specific demethylase 4A [Source:HGNC Symbol;Acc:22978]

Gene Synonyms

JHDM3A, JMJD2, JMJD2A, KIAA0677, TDRD14A

Location

About this transcript

This transcript has 22 exons, is annotated with 25 domains and features, is associated with 23832 variant alleles and maps to 771 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372396.3	KDM4A-001	4474	1064aa	ENSP00000361473.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS491	B4DGH3 O75164	NM_014663.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463151.1	KDM4A-002	1023	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485249.1	KDM4A-003	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481296.1	KDM4A-004	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472265.1	KDM4A-005	380	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 4,474 bps, Translation length: 1,064 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75164

CCDS

This transcript is a member of the Human CCDS set: CCDS491

Version

ENST00000372396.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000019960 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.