Transcript: ENST00000565855.1 SLC9A3R2-009

Description

solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 [Source:HGNC Symbol;Acc:11076]

Gene Synonyms

E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location

Chromosome 16: 2,083,265-2,087,981 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 3192 variant alleles and maps to 359 oligo probes.

Gene

This transcript is a product of gene ENSG00000065054.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424542.2	SLC9A3R2-001	2194	337aa	ENSP00000408005.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45382	H3BQS0 Q15599 Q6NTG0	NM_004785.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432365.2	SLC9A3R2-002	1564	326aa	ENSP00000402857.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45383	Q15599	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566198.1	SLC9A3R2-003	1199	226aa	ENSP00000456895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58407	Q15599	NM_001252076.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563587.1	SLC9A3R2-006	1037	231aa	ENSP00000455909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQS0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565855.1	SLC9A3R2-009	759	223aa	ENSP00000454690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN50	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561844.1	SLC9A3R2-007	738	166aa	ENSP00000457755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567504.1	SLC9A3R2-005	578	151aa	ENSP00000454361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMF5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565086.1	SLC9A3R2-008	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564033.1	SLC9A3R2-004	1087	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 759 bps, Translation length: 223 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000565855.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434454 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000565855.1 SLC9A3R2-009

Summary