Description
high mobility group 20B [Source:HGNC Symbol;Acc:5002]
Gene Synonyms
BRAF25, BRAF35, HMGX2, HMGXB2, PP7706, SMARCE1R, SMARCE1r, SOXL, pp8857
Location
Chromosome 19: 3,575,540-3,576,985 forward strand.
About this transcript
This transcript has 3 exons, is associated with 990 variant alleles and maps to 174 oligo probes.
Gene
This transcript is a product of gene ENSG00000064961.14 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000333651.6 | HMG20B-001 | 1596 | 317aa | ENSP00000328269.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45919 | C9J8X5 C9JQA7 Q9P0W2 | NM_006339.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000262949.7 | HMG20B-011 | 886 | 286aa | ENSP00000262949.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MDG7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000453933.1 | HMG20B-007 | 759 | 142aa | ENSP00000402877.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JQA7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000585900.1 | HMG20B-018 | 741 | 184aa | ENSP00000465293.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJR8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000416526.1 | HMG20B-005 | 711 | 215aa | ENSP00000410924.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J8X5 C9JQA7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000417382.1 | HMG20B-013 | 561 | 165aa | ENSP00000393904.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9K049 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000435022.1 | HMG20B-012 | 616 | 125aa | ENSP00000393481.1 | Nonsense mediated decay | F8WES5 | - | - | |
ENST00000585741.1 | HMG20B-017 | 363 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000488973.2 | HMG20B-002 | 2434 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000487894.1 | HMG20B-003 | 1242 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000464304.1 | HMG20B-009 | 881 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000493191.1 | HMG20B-010 | 852 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000470356.1 | HMG20B-006 | 806 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000486028.1 | HMG20B-004 | 719 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000461099.1 | HMG20B-014 | 687 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000483417.1 | HMG20B-008 | 580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |