Human (GRCh37.p13)
Description

high mobility group 20B [Source:HGNC Symbol;Acc:5002]

Gene Synonyms

BRAF25, BRAF35, HMGX2, HMGXB2, PP7706, SMARCE1R, SMARCE1r, SOXL, pp8857

Location
About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 2546 variant alleles and maps to 187 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000333651.6HMG20B-0011596317aaENSP00000328269.6
 
Protein coding
CCDS45919C9J8X5 C9JQA7 Q9P0W2
NM_006339.2GENCODE basic
ENST00000262949.7HMG20B-011886286aaENSP00000262949.7
 
Protein coding
B5MDG7 -CDS 3' incomplete
ENST00000453933.1HMG20B-007759142aaENSP00000402877.1
 
Protein coding
C9JQA7 -CDS 3' incomplete
ENST00000585900.1HMG20B-018741184aaENSP00000465293.1
 
Protein coding
K7EJR8 -CDS 5' incomplete
ENST00000416526.1HMG20B-005711215aaENSP00000410924.1
 
Protein coding
C9J8X5 C9JQA7 -CDS 3' incomplete
ENST00000417382.1HMG20B-013561165aaENSP00000393904.1
 
Protein coding
C9K049 -CDS 3' incomplete
ENST00000435022.1HMG20B-012616125aaENSP00000393481.1
 
Nonsense mediated decay
F8WES5 --
ENST00000585741.1HMG20B-017363No protein-
 
Processed transcript
---
ENST00000488973.2HMG20B-0022434No protein-
 
Retained intron
---
ENST00000487894.1HMG20B-0031242No protein-
 
Retained intron
---
ENST00000464304.1HMG20B-009881No protein-
 
Retained intron
---
ENST00000493191.1HMG20B-010852No protein-
 
Retained intron
---
ENST00000470356.1HMG20B-006806No protein-
 
Retained intron
---
ENST00000486028.1HMG20B-004719No protein-
 
Retained intron
---
ENST00000461099.1HMG20B-014687No protein-
 
Retained intron
---
ENST00000483417.1HMG20B-008580No protein-
 
Retained intron
---
Statistics

Exons: 7, Coding exons: 4, Transcript length: 616 bps, Translation length: 125 residues

Version

ENST00000435022.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000318099 (version 1)