Description
high mobility group 20B [Source:HGNC Symbol;Acc:5002]
Gene Synonyms
BRAF25, BRAF35, HMGX2, HMGXB2, PP7706, SMARCE1R, SMARCE1r, SOXL, pp8857
Location
Chromosome 19: 3,572,936-3,579,086 forward strand.
About this transcript
This transcript has 10 exons, is annotated with 17 domains and features, is associated with 4618 variant alleles and maps to 590 oligo probes.
Gene
This transcript is a product of gene ENSG00000064961.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000333651.6 | HMG20B-001 | 1596 | 317aa | ENSP00000328269.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45919 | C9J8X5 C9JQA7 Q9P0W2 | NM_006339.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000262949.7 | HMG20B-011 | 886 | 286aa | ENSP00000262949.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MDG7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000453933.1 | HMG20B-007 | 759 | 142aa | ENSP00000402877.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JQA7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585900.1 | HMG20B-018 | 741 | 184aa | ENSP00000465293.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJR8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000416526.1 | HMG20B-005 | 711 | 215aa | ENSP00000410924.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J8X5 C9JQA7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000417382.1 | HMG20B-013 | 561 | 165aa | ENSP00000393904.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9K049 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000435022.1 | HMG20B-012 | 616 | 125aa | ENSP00000393481.1 | Nonsense mediated decay | F8WES5 | - | - | |
| ENST00000585741.1 | HMG20B-017 | 363 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488973.2 | HMG20B-002 | 2434 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487894.1 | HMG20B-003 | 1242 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464304.1 | HMG20B-009 | 881 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493191.1 | HMG20B-010 | 852 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470356.1 | HMG20B-006 | 806 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486028.1 | HMG20B-004 | 719 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461099.1 | HMG20B-014 | 687 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483417.1 | HMG20B-008 | 580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |