Transcript: ENST00000395961.3 BCAS1-001

Description

breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:974]

Gene Synonyms

AIBC1, NABC1

Location

Chromosome 20: 52,560,080-52,687,133 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 5 domains and features, is associated with 51537 variant alleles and maps to 564 oligo probes.

Gene

This transcript is a product of gene ENSG00000064787.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000448484.1	BCAS1-002	6112	476aa	ENSP00000396361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFK2 H0Y542	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000395961.3	BCAS1-001	3303	584aa	ENSP00000379290.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13444	O75363	NM_003657.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371435.2	BCAS1-003	3020	506aa	ENSP00000360490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAF7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371440.3	BCAS1-201	2183	614aa	ENSP00000360495.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFK2 H0Y542 O75363	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434986.2	BCAS1-203	1337	250aa	ENSP00000409956.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFL4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411563.1	BCAS1-202	1160	164aa	ENSP00000397442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2C4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422805.1	BCAS1-004	882	247aa	ENSP00000399936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,303 bps, Translation length: 584 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75363

CCDS

This transcript is a member of the Human CCDS set: CCDS13444

Version

ENST00000395961.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079766 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395961.3 BCAS1-001

Summary