Transcript: ENST00000534200.1 DDX20-005

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:HGNC Symbol;Acc:2743]

Gene Synonyms

DP103, GEMIN3

Location

About this transcript

This transcript has 3 exons, is associated with 1454 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000475700.1	DDX20-002	4332	432aa	ENSP00000435660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369702.4	DDX20-001	4212	824aa	ENSP00000358716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS842	Q9UHI6	NM_007204.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536167.1	DDX20-201	1263	138aa	ENSP00000439026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533164.1	DDX20-003	1499	138aa	ENSP00000434085.1	Nonsense mediated decay		B4DWV7	-	-
ENST00000534200.1	DDX20-005	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524894.1	DDX20-004	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 562 bps,

Version

ENST00000534200.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388435 (version 1)