Transcript: ENST00000265388.5 TNPO3-001

Description

transportin 3 [Source:HGNC Symbol;Acc:17103]

Gene Synonyms

IPO12, MTR10A, TRN-SR, TRN-SR2, TRNSR

Location

About this transcript

This transcript has 23 exons, is annotated with 11 domains and features, is associated with 39998 variant alleles and maps to 1000 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393245.1	TNPO3-201	3771	957aa	ENSP00000376936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7E5	NM_012470.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482320.1	TNPO3-002	3585	857aa	ENSP00000420089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KMX1 E9PFH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471234.1	TNPO3-003	3283	859aa	ENSP00000418646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55162	Q9Y5L0	NM_001191028.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265388.5	TNPO3-001	3245	923aa	ENSP00000265388.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5809	B3KMX1 E9PFH4 Q9Y5L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471166.1	TNPO3-005	3019	957aa	ENSP00000418267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7E5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 3,245 bps, Translation length: 923 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5L0

CCDS

This transcript is a member of the Human CCDS set: CCDS5809

Version

ENST00000265388.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350929 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.