Transcript: ENST00000531738.1 CDON-007

Description

cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:17104]

Gene Synonyms

CDO, CDON1, HPE11, ORCAM

Location

Chromosome 11: 125,827,347-125,874,340 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 20644 variant alleles and maps to 573 oligo probes.

Gene

This transcript is a product of gene ENSG00000064309.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392693.3	CDON-001	9138	1287aa	ENSP00000376458.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58192	E9PNF2 E9PPQ7 E9PRD8 Q4KMG0	NM_016952.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531738.1	CDON-007	5803	641aa	ENSP00000432901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN78	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263577.7	CDON-002	4186	1264aa	ENSP00000263577.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8468	E9PN78 E9PNF2 E9PPQ7 E9PRD8 Q4KMG0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534661.1	CDON-004	1948	650aa	ENSP00000436755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000527967.1	CDON-010	722	142aa	ENSP00000436940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNF2 E9PPQ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531586.1	CDON-005	624	165aa	ENSP00000434212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNF2 E9PPQ7 E9PRD8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534818.1	CDON-008	459	111aa	ENSP00000437176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNF2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531830.1	CDON-006	1745	243aa	ENSP00000432571.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525625.1	CDON-003	1684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 5,803 bps, Translation length: 641 residues

Version

ENST00000531738.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386747 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000531738.1 CDON-007

Summary