Transcript: ENST00000261655.4 RIMBP2-001

Description

RIMS binding protein 2 [Source:HGNC Symbol;Acc:30339]

Gene Synonyms

KIAA0318, MGC15831, RBP2, RIM-BP2, RP11-662M24.2

Location

Chromosome 12: 130,880,682-131,002,410 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 37 domains and features, is associated with 58887 variant alleles and maps to 578 oligo probes.

Gene

This transcript is a product of gene ENSG00000060709.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261655.4	RIMBP2-001	6321	1052aa	ENSP00000261655.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31925	F5H3X3 O15034	NM_015347.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536002.1	RIMBP2-201	3868	645aa	ENSP00000439159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O15034	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535703.1	RIMBP2-002	3685	645aa	ENSP00000440347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O15034	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536632.1	RIMBP2-005	994	157aa	ENSP00000439030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3X3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540658.1	RIMBP2-004	552	62aa	ENSP00000439437.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544568.1	RIMBP2-003	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 6,321 bps, Translation length: 1,052 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15034

CCDS

This transcript is a member of the Human CCDS set: CCDS31925

Version

ENST00000261655.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000399520 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261655.4 RIMBP2-001

Summary